21 April 2010

Complex Carbohydrates



Complex Carbohydrates

- Know the structural components and differences between the glycoconjugate types
- Know the general biosynthetic and catabolic strategies and molecules involved
- Know the general function of each class of glycoconjugate
- Know the general biochemical principles associated with diseases resulting from defects in the catabolic pathways of the glycoconjugates

* Marks, Marks and Smith Chapter 30, primary source, Harper’s Ch 56 supersecondary source. Review Ch. 15,16 for sugar and lipid structural properties

General Biosynthetic and Catabolic Themes for Glycoconjugates
* An initial sugar residue is attached to a core protein or lipid, usually through a serine or asparagine residue.
* Sugar residues are added sequentially from nucleotide diphosphate sugar donors by specific glycosyltransferases in the endoplasmic reticulum and golgi.
* Glycosidases (sugar specific hydrolases) in the lysosome are responsible for degradation and catabolism
* Almost all diseases related to glycoconjugates result from defective lysosomal glycosidase function

UDP-Glucose Glycosyltranserase Reaction
Sugar Nucleotide Conversions
Proteoglycans
* Consist of a core protein, that is either transmembranous or secreted. Via serine residues, long, unbranched, repeating disaccharides of uronic acid (glucuronic or iduronic) and hexosamine (N-acetylglucosamine or N-acetylgalactosamine) are covalently attached to the protein on the (on the extracellular surface if membrane attached).
* These residues are frequently sulfated following polymer formation. Thus they possess a large net negative charge, are highly hydrated, and occupy a large amount of space extracellularly (good for their role as lubricants and molecular sieves). They also provide a large surface area for binding of other matrix components and some growth factors.
* Major components of the extracellular matrix, also in joint synovial fluid, vitreous humor of the eye, arterial walls, bone and cartilage

The main classes of disaccharide repeats found in glycosaminoglycans attached to protein
GAG-Carbohydrate Core Linkage to Protein

Sequential Biosynthetic Pathway for GAGs
Glycoproteins
There are three major classes of glycoproteins – those with carbohydrate chains that are N-linked (via an Asn), O-linked (via Ser or Thr) or linked via a glycosylphosphatidylinositol (GPI) lipid. These are primarily transmembranous proteins with the carbohydrates positioned extracellularly, and they are also secreted.

* For N-linked, the carbohydrate core structure is synthesized processively on an activated lipid carrier, dolichol phosphate, and transferred co-translationally to membrane proteins synthesized in the endoplasmic reticulum.

Three Main Types of Glycoprotein Structures
O-linked
N-linked
GPI-linked
GPI = glycosylphosphatidylinositol
Also: targeting signal for removal of damaged or mis-folded proteins from the cell
And: generally function to aid in the proper conformation and stability of membrane-associated proteins
Dolichol-linked Donor Oligosaccharide Synthesis for N-linked Glycoproteins
O-linked Glycoproteins (Mucins most common)
Glycolipids
* Carbohydrates are attached to ceramide (a sphingolipid: sphingosine plus fatty acid). Involved in cell-cell contact/interactions. The terminal carbohydrates can frequently be identical to carbohydrate chains on glycoproteins (Ex: blood group antigens)
* Cerebrosides – glycolipids with one or two sugars (glucose and galactose); if sulfated, are termed sulfatides, found in high concentrations in the brain
* Gangliosides – glycolipids that contain sialic acid residues, longer and branched relative to cerebrosides

Glycolipid Structural
Components
Sulfate donor
R = protein or ceramide
Bacteria sp. with binding proteins (lectins) for Lactosylceramide
I-Cell Disease Summary
Tay-Sachs Disease (Ex.)
* The most common form of GM2 gangliosidosis; the GM2 ganglioside accumulates due to a defect in hexosaminidase A. Causes swelling and loss of ganglion cells in the cerebral cortex, proliferation of glial cells, and demyelination of peripheral nerves.
* Rare defect in general population, but occurs 1 in every 3600 births in the U.S. Jewish population descended from Eastern Europe (ex: 1 in 28 Ashkenazi Jews carry the defect).
* No effective treatments; genetic counseling and screening are the primary approaches used to minimize occurrence.

Complex Carbohydrates

Read more...

Sphingolipid Disorders



Sphingolipid Disorders
by:Eric Niederhoffer
SIU-SOM

Sphingolipids (phospho- or glycolipids)

General Structure
Gangliosidoses
Generalized gangliosidosis
Tay-Sachs disease
Niemann-Pick disease
Metachromatic leukodystrophy
Krabbe’s disease
Gaucher’s disease
b-galactosidase
b-hexosaminidase A
GM2 activator
neuraminidase
(sialidase)
SAP-B
b-galactosidase
SAP-B, SAP-C
b-glucosylceramidase
SAP-C
b-hexosaminidase A&B
a-galactosidase A
SAP-B
sphingomyelinase
arylsulfatase A
SAP-B
b-galactosylceramidase
SAP-A, SAP-C
Cerezyme
Targeting of Lysosomal Enzymes to Lysosomes
Addition of M6P to lysosomal enzymes
Recognition by MPRs
M6P independent pathways

Review Questions

* How do you interpret ganglioside names (G, D, M, 1, 2, 3)?
* What do the different lysosomal enzyme names mean in the context of removing saccharides?
* Where does ganglioside degradation occur?

Sphingolipid Disorders

Read more...

11 April 2010

Infectious Diseases of the Respiratory System



Infectious Diseases of the Respiratory System

Infections of the Respiratory tract
* Most common entry point for infections
* Upper respiratory tract
* Lower respiratory tract


Protective Mechanisms
Normal flora: Commensal organisms
* Limited to the upper tract
* Mostly Gram positive or anaeorbic
* Microbial antagonist (competition)

Other Protective Mechanisms
* Nasal hair, nasal turbinates
* Mucus
* Involuntary responses (coughing)
* Secretory IgA
* Immune cells

Selected Bacterial Infections

Pharyngitis
Pneumonia - Streptococcus pneumoniae
Diphtheria - Corynebacterium diphtheriae
Tuberculosis - Mycobacterium tuberculosis
Whooping cough - Bordetella pertussis
Streptococcus pyogenes
Group A Strep
Strep Throat
Scarlet Fever
Bacterial Pneumonia
Streptococcus pneumoniae
Bacterial Pneumonia
Streptococcus pneumoniae
Diphtheria
* Transmitted by droplets or fomites
* Infects the upper respiratory tract
* Begins with severe sore throat, low-grade fever and swollen lymph nodes or with skin rash, 1-6 days after infection

Corynebacterium diphtheriae
* Aerobic Gram + bacillus
* Toxin inhibits protein synthesis of cells to which it binds
* Destroyed cells and WBC form "pseudomembrane" which blocks airways
Bordetella pertussis
Pertussis (Whooping Cough)
Mycobacterium tuberculosis
Tubercule formation
Tuberculosis
Multi-Drug Resistant
TB Skin Test
Virus infections
Fungal Infections
Respiratory Syncytial Virus
* Enveloped (membrane) RNA virus
* Spread by respiratory droplets
* Community outbreaks in late fall to spring
* Upper respiratory tract infection – epithelial cells
* May be fatal in infants
Influenza Virus
An enveloped RNA virus
Coccidioides immitis
Valley Fever is an Endemic Disease
Coccidioides immitis

Infectious Diseases of the Respiratory System.ppt

Read more...
All links posted here are collected from various websites. No video or powerpoint files are uploaded on this blog. If you are the original author and do not wish to display your content on this blog please Email me anandkumarreddy at gmail dot com I will remove it. The contents of this blog are meant for educational purpose and not for commercial use. If you use any content give due credit to the original author.

This site uses cookies from Google to deliver its services, to personalise ads and to analyse traffic. Information about your use of this site is shared with Google. By using this site, you agree to its use of cookies.

  © Blogger templates Newspaper III by Ourblogtemplates.com 2008

Back to TOP