24 March 2010

Blood Collection



Blood Collection

An overview of the process involved in collecting donor blood

Donor Screening
* Starts with the donor and first impressions are critical
* Clean, well lit donation facility from waiting room to collection area
* Pleasant, professional staff who can ask the appropriate questions, observe and interpret the responses, and ensure that the collection process is as pleasant as possible

Blood Bank versus Blood Center
* Confusion exists and terms are sometimes used inappropriately
* Blood bank in a hospital is also known as the transfusion service, performs compatibility testing and prepares components for transfusion
* Blood Center is the donation center, screens donors, draws donors, performs testing on the donor blood, and delivers appropriate components to the hospital blood bank

Standards, Regulations, Governing Bodies
* Strict guidelines exist and inspections are performed in both blood centers and blood banks to ensure the safety of the donors and patients
* Some or all of the following agencies may be involved:
o AABB – American Association of Blood Banks
o FDA – Food and Drug Administration
o CAP – College of the American Pathologists
o JCAHO - Joint Commission on the Accreditation of Hospital Organizations
o NCCLS – National Committee for Clinical Laboratory Standards

Donor Screening
* Medical History based on a standardized questionnaire obtains critical information about the donor’s health and risk factors which may make it unsafe for donation
* Physical Exam which includes blood pressure, temperature, pulse and screen for anemia are performed to ensure donor is healthy enough to donate.
* Two goals of screening
o Protect the health of the potential donor
o Protect the health of the potential recipient

Donor Registration
* Donor signs in
* Written materials are given to the donor which explains high risk activities which may make the donor ineligible
* Donor must be informed and give consent that blood will be used for others unless they are in a special donor category
* First time donors must provide proof of identification such as SS#, DL#, DOB, address and any other unique information.
* Repeat donors may be required to show DL or some other photo ID

Frequency of donation
* Whole blood or red blood cells 8 weeks
* Plateletpheresis – up to 24 times/year
* Plasmapheresis– once every 4 weeks, can be done twice a week
* Granulocytes

Medical History
* A thorough history is obtained each time
* Standardized universal questionnaire is used
* Questions are asked that are very intimate in nature but are critical in assessing HIV or HBV risks
* Medications the donor taking are present in plasma, may cause deferral
* Infections the donor has may be passed to recipient, may be cause for deferral

12 Month Deferral
* Any intimate sexual relations with HIV positive, HBV positive, hemophiliacs, drug users or individuals receiving drugs/money for sex.
* Recipient of blood, components or blood products such as coagulation factors
* Sexually transmitted disease-if acquired indicates safe sex not practiced and donor at risk for HIV and HBV
* Travel to malarial endemic country

Temporary Deferrals
* Certain immunizations
o 2 weeks -MMR, yellow fever, oral polio, typhoid
o 4 weeks -Rubella, Chicken Pox
o 2 months – small pox
* Pregnancy – 6 weeks upon conclusion
* Certain medications
o Proscar/Propecia, Accutain – 1 month
o Avodart – 6 months
o Soriatane – 3 years
o Tegison - permanent

Permanent Deferrals
* HIV, HBV, or HCV positive
* Protozoan diseases such as Chagas disease or Babesiosis
* Received human pituitary growth hormone
* Donated only unit of blood in which a recipient contracted HIV or HBV
* Was the only common donor in 2 cases of post-transfusion HIV or HBV in recipient
* Lived in a country where Creutzfeld-Jacob disease is prevalent
* Most cancers except minor skin cancer and carcinoma in-situ of the cervix
* Severe heart disease, liver disease

Helpful Hint
* Permanent deferral – any member of high risk group such as: HIV/HBV/HCV pos, drugs/sex for money, cancer, serious illness or disease, CJD, Chagas disease, Babesiosis
* 12 month deferral – sex with any high risk group, any blood exposure, recipient of blood/blood products, STD, jail/prison, rabies vaccine after exposure, HBIG, malaria
* Have to memorize: medications and vaccinations

Self-Exclusion
* Two stickers
o “Yes, use my blood”
o “No, do not use my blood”
* After interview the donor will place the appropriate bar coded label on the donation record
* If “no” selected the unit is collected, fully tested, but not used for transfusion
* Allows donors who know they are at risk to “save face” if pressured to donate by friends and family

Donor Categories
* “Allogeneic”, “homologous” and “random donor” terms used for blood donated by individuals for anyone’s use
* Autologous – donate blood for your own use only
* Recipient Specific Directed donation – donor called in because blood/blood product is needed for a specific patient
* Directed Donor – patient selects their own donors
* Therapeutic bleeding – blood removed for medical purposes such as in polycythemia vera. NOT used for transfusion.

Auto/Directed Blood Labels
Donor Categories
* Safest is autologous, blood is your own, no risk of disease acquisition
* Most dangerous is Directed Donor, you select a donor who may, unknown to you, be in a high risk category but feels obligated to follow through and donate

Blood Collection
* Materials used are sterile and single use.
* Most important step is preparing the site to a state of almost surgical cleanliness.
* Bacteria on skin, if present, may grow well in stored donor blood and cause a fatal sepsis in recipient
* Use 16-17 gauge needle to collect blood from a single venipuncture within 15 minutes
* Collect 450 +/- 45 mLs of blood

Donor Reactions
* Syncope (fainting)
o Remove needle immediately
* Hyperventilation
o Have donor rebreathe into paper bag.
* Nausea/vomiting
* Twitching/muscle spasms
* Hematoma
* Convulsions – rare, get immediate assistance
* Cardiac difficulties

Post-Phlebotomy Care
* Donor applies pressure for 5 minutes
* Check and bandage site
* Have donor sit up for few minutes
* Have donor report to refreshment area for additional 15 minutes of monitoring

Post-Phlebotomy Instructions
* Eat/drink before leaving
* Wait until staff releases you
* Drink more fluids next 4 hours
* No alcohol until after eating
* Refrain from smoking for 1 hour
* If bleeding continues apply pressure and raise arm
* Faint or dizzy sit with head between knees
* Abnormal symptoms persist contact blood center.
* Remove bandage

Testing Donor Blood
* CANNOT rely on previous testing
* Records must be kept for 5 years

Serological Testing
* ABO/D typing
* Antibody Screen – if positive, ID antibody, cannot make plasma products
* Antibodies to other blood group antigens which are present in the donor may react with recipient red cells resulting in a reaction.

Disease Testing
* Disease testing include:
o HBsAG
o HBc
o HCV
o HIV 1&2
o HTLV I/II
o RPR
o NAT for HIV-1, HCV & WNV

Results of Testing
* Tests for disease markers must be negative or within normal limits.
* Donor blood which falls outside these parameters must be quarrantined.
* Repeat testing, if still abnormal must dispose.

Transfusion Service Testing
* The only repeat testing required is:
o ABO on red cell products
o D typing (IS) on D negative red cell products
* Plasma products (FFP, CRYO, PLTS) do not require any testing.
* Donor samples must be stored at 1-6C for at least 7 days after transfusion
o ADSOL unit transfused today must save sprig for one week
o Many facilities will pull a sprig from each donor during processing and save all sprigs for 49 days, regardless of expiration of unit

Summary
* Blood collection starts with screening of the donor to:
o Ensure they are healthy enough to donate
o Ensure they do not have transmissible diseases
* Many organizations set standards and monitor all aspects of blood collection and administration.
* Collection of blood must be done in such a manner as to ensure sterility of the component.
* Testing of donor blood includes serological testing for ABO/D typing, antibody screening, and testing for markers indicating infection.
* The blood supply is NOT safe, only careful screening and testing can prevent, as much as possible, disease transmission.

Blood Collection

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Assessment of Protein Status



Assessment of Protein Status
FCSN 442 - Nutrition Assessment Laboratory
By:Dr. David L. Gee
Central Washington University

Assessment of Protein Status
* Anthropometric Assessment
o body composition estimations
o midarm muscle circumference/area
* Laboratory Assessment
o serum albumin
o other serum proteins (transferrin, prealbumin, retinol-binding protein)
o urinary creatinine excretion
o total lymphocyte count

Midarm Muscle Area
* Estimate of MAMA is an estimate of overall muscle mass
* Assumptions

Midarm Muscle Circumference
* MAMC = AC - (.314 x TSF)

* “…change in arm muscle area is greater than the change in mid-arm circumference. Consequently, changes in upper-arm musculature are not as easily detected by measurement of mid-arm circumference as by AMA. Therefore, AMA is the preferred nutritional index.”

Arm Muscle Area
* AMA = ((MAC - (3.14 x TSF)2 ) / (4 x 3.14)
* adjusted AMA

Guidelines for Interpreting Percentile Values for Arm Muscle Area (appendix R)
Biochemical Assessment of Protein Status
* Two protein compartment model
* “No single test or group of tests can be recommended at this time as a routine and reliable indicator of protein status.” Young, 1990
* “…a combination of measures can produce a more complete picture of protein status.”

Serum Albumin
* Major serum protein
* Most common indicator of depleted protein status
* Half life = 14-20 days
* poor indicator of early protein depletion and repletion
* Levels affected by rate of synthesis (liver disease may reduce levels)
* May reflect level of physiological stress
* Levels affected by abnormal losses
* Levels affected by fluid status
* Normal values: 4.5 g/dL + 35-50 (SD)

Serum Transferrin
* Function: transport protein for iron
* half-life = 8-9 days
* Influenced by other factors
* limited usefulness in protein status assess.

Serum Prealbumin
* aka. transthyretin and thyroxine-binding prealbumin
* functions:
* short half life (2-3d), small body pool
* Returns to normal at beginning of nutritional therapy
* Influenced by other factors
* generally considered preferable than albumin and transferrin

Retinol Binding Protein
* Function: carrier for retinol
* responds like prealbumin
* very rapid turnover (12 hours), very small body pool
* generally not considered to be more useful than prealbumin

Immunocompetence
* Immune system affected by nutritional status
* Tests of immunocompetence useful functional indicators of nutritional status
* Delayed Cutaneous Hypersensitivty (DCH)
o intradermal injection of antigens
* Total Lymphocyte Count (TLC)

Total Lympocyte Count
* White blood cell count
* TLC = (%lymp x WBC)x100
* Normal = 1200-1800 cells/mm3
* Moderate PCM = 800-1200
* Severe PCM = < 800 Urinary Creatinine Excretion * Creatinine excreted in proportion to muscle mass * LBM estimated by comparing 24-hr urine creatinine excretion with standard based on stature or reference values of 23 and 18 mg/kg for M and F Example: Creatinine Height Index * CHI = (24 hr urine creatinine x 100) / (expected 24 hr urine creatinine for height) o CHI = 1436/1596 x 100 = 90% * expected values in table 9-1 (p306) o CHI > 80% = normal
o CHI = 60-80% = mild protein depletion
o CHI = 40-60% = moderate depletion
o CHI < 40% = severe depletion Assessment of Protein Status

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Immune System Overview Mechanisms of Immunosuppression



Immune System Overview Mechanisms of Immunosuppression
By:Bob Luebke
Immunotoxicology Branch
Experimental Toxicology Division
NHEERL, ORD

Role of the Immune System in Homeostasis

* Bidirectional interaction with other systems
o Reproduction
o Endocrine
o CNS

Basics of Immunology
The Immune Response
Innate Immunity
Adaptive (Acquired) Immunity
-Phylogenetically ancient
-Limited recognition
-Rapid (minutes – hours)
- No cell proliferation required
-Limited memory (? mammals)
-First appeared in jawed fishes
- Infinite array of specificities
- Slow (days)
-Requires proliferation and differentiation
-Long-lasting memory

Basics of Immunology
* The adaptive immune response to antigen
Organs of the Immune System
Immune System Anatomy
Organs of the Immune System
Thymus: source of naive T cells
Fate of T Cells in the Thymus
Positive selection: optimal binding to self Ag prevents apoptosis
Negative selection: superoptimal binding to self Ag induces apoptosis
B cells: Tolerance to “Self”
Anergy: low expression of
IgM on surface; can’t bind Ag
Clonal ignorance: too few
copies of Ag in the periphery

Thymus size and architecture:
* May be very sensitive to xenobiotics
* Also sensitive to acute toxicity

Methods for Assessing Direct Immunotoxicity Associated with Exposure to Chemicals
Organs of the Immune System
Spleen: Antigen trapping and presentation, clonal expansion, cellular export
Organs of the Immune System
Lymph nodes: Antigen trapping and presentation, clonal expansion, cellular export
Cells of the Immune System
Innate Immune System: Granulocytes
Neutrophil (“PMN”)
* First responders
* Phagocytosis and killing of bacteria
* Inflammation

Eosinophil
* Allergy
* Killing parasite larvae
Basophil
* Circulating mast cells
* Allergy/anaphylaxis

Innate Immune System: Granulocytes
Neutrophil (“PMN”)
* First responders
* Phagocytosis and killing of bacteria
* Inflammation
Cells of the Immune System
Innate Immune System: Monocytes
Monocyte/macrophage
Macrophage with ingested
asbestos fiber (encarta.msn.com)
* Phagocytosis and killing of bacteria
* Antigen processing
* Inflammation
Adaptive Immune System: Lymphocytes
Activated B cell
Peripheral blood
Activated T cell (SEM)
* B cells: Mature into plasma cells, secrete antibody (IgM, IgG, IgA, IgE, IgD)
* T cells: T helper - produce stimulatory and regulatory cytokines
* T cells: T cytotoxic/suppressor – contact-dependent cytotoxicity,

regulation of immune response
* NK cells: direct killing of cells (innate arm of IS)

Plasma Cells Produce Antibodies
* IgM: Primary response, efficient agglutination
* IgG: Recall response, highest concentration
* IgA: Mucosal surfaces, trapping of microbes
* IgE: Allery/anaphylaxis

Factors Affecting Immunocompetence
* Age
* Gender
* Genotype
* Nutritional status
* Life style choices
* Acute toxicity
CONCEPT: Individual immunocompetence, in the absence of xenobiotic exposure, is complex, dynamic and affected by fixed and variable factors. At the population level, the “normal” range is broad.

Immunocompetence in the Young: Innate immunity
* Neutrophils
* NK cells
Immunocompetence in the Young: Adaptive immunity
* Humoral immunity
* Cellular immunity
* Resistance to infection
Advanced Age and Immunocompetence

* Innate Immunity
* Adaptive immunity
* Resistance to infection

Gender and Immunocompetence
Genotype and Immunocompetence
Lifestyle and Immunocompetence
* Recreational drug use
* Excessive use of alcohol
* Smoking
* Stress

Xenobiotic Exposure and Immunocompetence
Immune
System
Exposure
Suppression
Infection
Neoplasia
Modulation
Allergy
Autoimmunity

Consequences of Xenobiotic Exposure on Immunocompetence
“Pre-immune” Mechanisms of Defense
Immune Mediated Resistance to Infection
Organism Factors Influencing Host Resistance
Mechanisms of Chemically-induced Immunosuppression
Mechanisms of Suppression:
Effects on Supply of Cells
Mechanisms of Suppression: Effects on Supply of Cells
UVB (320-280 nm) exposure
Mechanisms of Suppression: Tolerance Induction (and then some)
Mechanisms of Suppression: Tolerance Induction (human studies)
Mechanisms of Suppression: Modulation of cytokine production
Mechanisms of Suppression: Th1/Th2 Polarization
Mechanisms of Suppression: Disruption of innate immunity
Human and Mouse Macrophage Responses to Ozone in vivo
Mechanisms of Chemically-induced Immunosuppression
Mechanisms of Suppression:
Summary
* Reduced supply of immune system cells
* Misdirection of the immune system
* Direct effects on cells
* Combination of effects
Decreased Host Resistance: Implications for Human Health

Immune System Overview Mechanisms of Immunosuppression

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23 March 2010

Metabolic Disorders - Inborn Errors of Metabolism



Metabolic Disorders - Inborn Errors of Metabolism
By:Dr. Sara Mitchell

Overview
* Proteins - what are they and what do they do?
* Amino Acids - what are they and what do they do?

Eight Essential Amino Acids
* Tryptophan
* Lysine
* Methionine
* Phenylaline
* Theronine
* Valine
* Leucine
* Isolecucine

Inborn Errors of metabolism
* Affects amino acid & protein, carbohydrate, and lipid metabolism.
* Most disorders are autosomal recessive in transmission
* Most disorders are evident at or soon after birth.
* Early detection and treatment are essential to the prevention of irreversible cognitive impairment and early death

Newborn Screening: What is it?
* A test developed in 1961 by Dr. Robert Guthrie to evaluate infants for certain genetic anomalies, inborn errors of metabolism, and other disorders.

http://health.state.ga.us/programs/nsmscd/

Phenylketonuria (PKU):What is it?
* The most common amino acidemia. Classic PKU develops in the absence of the enzyme phenylalanine hydroxylase.
* Incidence

Phenylketonuria: How’s it happen?
* Cause
o absent Phenylalanine hydroxylase causes a build up phenylalanine
* Effect

Phenylketonuria
* Treatment
* Prognosis

Galactocemia: What is it?
* An inborn error of carbohydrate metabolism in which the hepatic enzyme galactose 1-phosphate uridine transferase is absent.
* Incidence

Galactocemia: How does it happen?
Galactocemia: What are the clinical manifestations?
Galactocemia: Diagnosis & Treatment
* Diagnosis
* Treatment

Metabolic Disorders - Inborn Errors of Metabolism.ppt

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Amino Acid Catabolism: Carbon Skeletons



Amino Acid Catabolism: Carbon Skeletons
Copyright © 1999-2007 by Joyce J. Diwan.
All rights reserved.

Molecular Biochemistry II

Amino Acid Carbon Skeletons
Amino acids, when deaminated, yield a-keto acids that, directly or via additional reactions, feed into major metabolic pathways (e.g., Krebs Cycle).
Amino acids are grouped into 2 classes, based on whether or not their carbon skeletons can be converted to glucose:

o glucogenic
o ketogenic.

Carbon skeletons of glucogenic amino acids are degraded to:
o pyruvate, or
o a 4-C or 5-C intermediate of Krebs Cycle. These are precursors for gluconeogenesis.
Glucogenic amino acids are the major carbon source for gluconeogenesis when glucose levels are low.
They can also be catabolized for energy, or converted to glycogen or fatty acids for energy storage.

Carbon skeletons of ketogenic amino acids are degraded to:
o acetyl-CoA, or
o acetoacetate.

Acetyl CoA, & its precursor acetoacetate, cannot yield net production of oxaloacetate, the gluconeogenesis precursor.
For every 2-C acetyl residue entering Krebs Cycle, 2 C leave as CO2.
Carbon skeletons of ketogenic amino acids can be catabolized for energy in Krebs Cycle, or converted to ketone bodies or fatty acids.
They cannot be converted to glucose.
The 3-C a-keto acid pyruvate is produced from alanine, cysteine, glycine, serine, & threonine.
Alanine deamination via Transaminase directly yields pyruvate.
Serine is deaminated to pyruvate via Serine Dehydratase.
Glycine, which is also product of threonine catabolism, is converted to serine by a reaction involving tetrahydrofolate (to be discussed later).

The 4-C Krebs Cycle intermediate oxaloacetate is produced from aspartate & asparagine.
Aspartate transamination yields oxaloacetate.
Aspartate is also converted to fumarate in Urea Cycle. Fumarate is converted to oxaloacetate in Krebs cycle.
Asparagine loses the amino group from its R-group by hydrolysis catalyzed by Asparaginase.
This yields aspartate, which can be converted to oxaloacetate, e.g., by transamination.
The 4-C Krebs Cycle intermediate succinyl-CoA is produced from isoleucine, valine, & methionine.
Propionyl-CoA, an intermediate on these pathways, is also a product of b-oxidation of fatty acids with an odd number of C atoms.
The branched chain amino acids initially share in part a common pathway.
Branched Chain a-Keto Acid Dehydrogenase (BCKDH) is a multi-subunit complex homologous to Pyruvate Dehydrogenase complex.
Genetic deficiency of BCKDH is called Maple Syrup Urine Disease (MSUD).
High concentrations of branched chain keto acids in urine give it a characteristic odor.
Propionyl-CoA is carboxylated to methylmalonyl-CoA.
A racemase yields the L-isomer essential to the subsequent reaction.
Methylmalonyl-CoA Mutase catalyzes a molecular rearrangement: the branched C chain of methylmalonyl-CoA is converted to the linear C chain of succinyl-CoA.
The carboxyl that is in ester linkage to the thiol of coenzyme A is shifted to an adjacent carbon atom, with opposite shift of a hydrogen atom.

Recall that coenzyme A is a large molecule.
Coenzyme B12, a derivative of vitamin B12 (cobalamin), is the prosthetic group of Methylmalonyl-CoA Mutase.
A crystal structure of the enzyme-bound coenzyme B12.
Coenzyme B12 contains a heme-like corrin ring with a cobalt ion coordinated to 4 ring N atoms.
o methyl C atom of 5'-deoxyadenosine (not shown).
o an enzyme histidine N
When B12 is free in solution, a ring N of the dimethylbenzimidazole serves as axial ligand to the cobalt.
When B12 is enzyme-bound, a His side-chain N substitutes for the dimethylbenzimidazole.
Within the active site, the Co atom of coenzyme B12 has 2 axial ligands:
Homolytic cleavage of the deoxyadenosyl C-Co bond during catalysis yields a deoxyadenosyl carbon radical, as Co3+ becomes Co2+.
Reaction of this with methylmalonyl-CoA generates a radical substrate intermediate and 5'-deoxyadenosine.
Following rearrangement of the substrate, the product radical abstracts a H atom from the methyl group of 5'-deoxyadenosine.
This yields succinyl-CoA and the 5'-deoxyadenosyl radical, which reacts with coenzyme B12 to reestablish the deoxyadenosyl C-Co bond.

Methyl group transfers are also carried out by B12 (cobalamin).
Methyl-B12 (methylcobalamin), with a methyl axial ligand substituting for the deoxyadenosyl moiety of coenzyme B12, is an intermediate of such transfers.
E.g., B12 is a prosthetic group of the mammalian enzyme that catalyzes methylation of homocysteine to form methionine (to be discussed later).
o Vitamin B12 is synthesized only by bacteria.
Ruminants get B12 from bacteria in their digestive system.
Humans obtain B12 from meat or dairy products.
o Vitamin B12 bound to the protein gastric intrinsic factor is absorbed by cells in the upper part of the human small intestine via receptor-mediated endocytosis.
B12 synthesized by bacteria in the large intestine is unavailable.
Strict vegetarians eventually become deficient in B12 unless they consume it in pill form.
o Vitamin B12 is transported in the blood bound to the protein transcobalamin, which is recognized by a receptor that mediates uptake into body cells.

Explore via Chime
Methylmalonyl-CoA Mutase
with its prosthetic group,
Coenzyme B12.
Desulfo-CoA (without the
thiol) is at the active site.
The deoxyadenosyl moiety is lacking in the crystal.

The 5-C Krebs Cycle intermediate a-ketoglutarate is produced from arginine, glutamate, glutamine, histidine, & proline.
Glutamate deamination via Transaminase directly yields a-ketoglutarate.
Glutamate deamination by Glutamate Dehydrogenase also directly yields a-ketoglutarate.
Histidine is first converted to glutamate. The last step in this pathway involves the cofactor tetrahydrofolate.
Tetrahydrofolate (THF), which has a pteridine ring, is a reduced form of the B vitamin folate.
Within a cell, THF has an attached chain of several glutamate residues, linked to one another by isopeptide bonds involving the R-group carboxyl.
THF exists in various forms, with single-C units, of varying oxidation state, bonded at N5 or N10, or bridging between them.
In these diagrams N10 with R is r-aminobenzoic acid, linked to a chain of glutamate residues.
The cellular pool of THF includes various forms, produced and utilized in different reactions.
N5-formimino-THF is involved in the pathway for degradation of histidine.
Reactions using THF as donor of a single-C unit include synthesis of thymidylate, methionine, f-methionine-tRNA, etc.
In the pathway of histidine degradation, N-formiminoglutamate is converted to glutamate by transfer of the formimino group to THF, yielding N5-formimino-THF.
Because of the essential roles of THF as acceptor and donor of single carbon units, dietary deficiency of folate, genetic deficiencies in folate metabolism or transport, and the increased catabolism of folate seen in some disease states, result in various metabolic effects leading to increased risk of developmental defects, cardiovascular disease, and cancer.

Aromatic Amino Acids
Aromatic amino acids phenylalanine & tyrosine are catabolized to fumarate and acetoacetate.
Hydroxylation of phenylalanine to form tyrosine involves the reductant tetrahydrobiopterin. Biopterin, like folate, has a pteridine ring.
Dihydrobiopterin is reduced to tetrahydrobiopterin by electron transfer from NADH.
Thus NADH is secondarily the e- donor for conversion of phenylalanine to tyrosine.
Overall the reaction is considered a mixed function oxidation, because one O atom of O2 is reduced to water while the other is incorporated into the amino acid product.
O2, tetrahydrobiopterin, and the iron atom in the ferrous (Fe++) oxidation state participate in the hydroxylation.
O2 is thought to react initially with the tetrahydrobiopterin to form a peroxy intermediate.
Phenylalanine Hydroxylase includes a non-heme iron atom at its active site.
X-ray crystallography has shown the following are ligands to the iron atom:
His N, Glu O & water O.
(Fe shown in spacefill & ligands in ball & stick).
deamination via transaminase) accumulate in blood & urine.
Mental retardation results unless treatment begins immediately after birth. Treatment consists of limiting phenylalanine intake to levels barely adequate to support growth. Tyrosine, an essential nutrient for individuals with phenylketonuria, must be supplied in the diet.
Genetic deficiency of Phenylalanine Hydroxylase leads to the disease phenylketonuria.
Phenylalanine & phenylpyruvate (the product of phenylalanine
Tyrosine is a precursor for synthesis of melanins and of epinephrine and norepinephrine.
High [phenylalanine] inhibits Tyrosine Hydroxylase, on the pathway for synthesis of the pigment melanin from tyrosine. Individuals with phenylketonuria have light skin & hair color.
Methionine S-Adenosylmethionine by ATP-dependent reaction.
SAM is a methyl group donor in synthetic reactions.
The resulting S-adenosylhomocysteine is hydrolyzed to homocysteine.
Homocysteine may be catabolized via a complex pathway to cysteine & succinyl-CoA.
Or methionine may be regenerated from homocysteine by methyl transfer from N5-methyl-tetrahydrofolate, via a methyltransferase enzyme that uses B12 as prosthetic group.
The methyl group is transferred from THF to B12 to homocysteine.
Another pathway converts homocysteine to glutathione.
In various reactions, S-adenosylmethionine (SAM) is a donor of diverse chemical groups including methylene, amino, ribosyl and aminoalkyl groups, and a source of 5'-deoxyadenosyl radicals.
But SAM is best known as a methyl group donor.

Examples:
S-adenosylmethionine as methyl group donor
o methylation of bases in tRNA
o methylation of cytosine residues in DNA
o methylation of norepinephrine epinephrine
o conversion of the glycerophospholipid
phosphatidyl ethanolamine phosphatidylcholine via methyl transfer from SAM.
Enzymes involved in formation and utilization of S-adenosylmethionine are particularly active in liver.
Liver has important roles in synthetic pathways involving methylation reactions, & in regulation of blood methionine.
Methyl Group Donors

Methyl group donors in synthetic reactions include:

* methyl-B12
* S-adenosylmethionine (SAM)
* N5-methyl-tetrahydrofolate (N5-methyl-THF)
Lysine & Tryptophan

Amino Acid Catabolism: Carbon Skeletons.ppt

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Phenylketonuria (PKU)



Phenylketonuria (PKU)
(fen'-il-kee'-to-nu'-ria)
By:Ashley Ryan

What is PKU?

* An inherited metabolic disease in which mental retardation can be prevented by a specific diet
* 1 out of 50 people are carriers of defective gene; 1 in 10,000 births
* Rare condition where a baby is born lacking the ability to break down phenylalanine.
* Phenylalanine is an amino acid found in many foods. It is characterized by higher than normal levels of phenylalanine in the blood which can cause damage to the brain and mental retardation
* The brain suffers and is damaged due to a tremendous buildup of phenylalanine

*This then results in damage of the CNS & causes brain damage

Causes & Symptoms
* Since PKU is inherited it is passed down through families
* Which means both parents must pass on the defective gene to there offspring; known as an autosomal recessive trait
* Phenylalanine is involved in the body’s production of melanin which is the pigment for skin and hair color – children with PKU generally have lighter skin, hair and eyes
* Other symptoms include

Treatment
* PKU is in fact treatable with the correct strictly followed diet very low in phenylalanine
* If diet is not followed brain impairment can occur or error of metabolism can be associated with M.R in first year of life.
* Association with attention-deficit hyperactivity disorder (ADHD) most common problem in those who don’t follow a strict diet
* If diet is properly followed esp. in first few years of life where it is most crucial an outcome of better physical and mental health will follow
* Examples of foods low in phenylalanine: milk, eggs, fish oil, special formula called Lofenalac .
* Lofenalac provides essential amino acids and can be used throughout life. It not only provides amino acids but also vitamins and minerals.
* Can think of it as a super food for PKU patients

Testing for PKU
* It is IMPERTATIVE that phenylalanine restrictions on diet is introduced after birth to prevent the neurodevelopment effects of PKU
* How is PKU tested?
* Blood is routinely drawn from the infants for testing
* A “heel stick” is done and then collected on special blotter paper
* Routine testing includes phenylketonuria and blood type

Prevention
* Overall highly recommend to have strong relationship with physician
* An Enzyme Assay can determine if parents carry defective gene
* Chorionic villus Sampling - screen unborn baby for possibility of PKU
* It is very important that women with PKU closely follow a strict low-phenylalanine diet both before becoming pregnant and throughout the pregnancy, since build-up of this substance will damage the developing baby even if the child has not inherited the defective gene.

Age and Diet- controversy
* The age when a diet can or should be discontinued has been debatable over decades
* Generally- PKU centers advise a life-long diet  especially for female patients
* A study was done that looked at progress of children who ended their diet at an early age
* the main focus of the study was the effects on neurological/ intellectual performance
* The participants abilities were compared during treatment and after the diet was discontinued
* RESULTS- It was shown that children who maintained the diet had fewer deficits to those terminating the diet before the age of 10
* Overall the study said a diet should remain strict to at least the age of 10!
* Although this was said also recommended to maintain diet in adulthood
* can be modified but not completely eliminated

Issues in Adults with PKU
* Several studies said that discontinuation of diet effect
* New problems with PKU:
* Adults w/ PKU who remained on diet but weren't as strict w what they ate showed white matter abnormalities when given MRI indicating a reduction in myelin.
* *** These conditions disappeared after reintroducing the strict diet ***
* Neurological investigations in early treated adults w/ PKU who stopped the diet showed higher incidence of neurological signs including:

-tremors
-clumsy motor coordination
* Investigation on Psychological problems also
-severe behavior/ psychiatric problems are seen in profound retarded/untreated adults w/ PKU in their 30’s-40’s.
* Claims that reintroduction of restricted diet symptoms can sometimes be reversible
* Adults who discontinued the diet have had cases of
* - depression, anxiety, social withdrawal, phobias, low self-esteem, neurotic behavior
* In 2009 it was stated PKU patients should be encouraged to remain on a life long diet and also recommended to:

-take nutritional supplements
* Blood PhE levels should be monitored every 3 months
* Yearly clinical review
* PKU pregnant women recommendations include:
* Being under control of physician specialized in
* metabolic disease, gynecologist, and dietician
* Detailed ultrasound @ 20 weeks of gestation
* Seen every 3 to 4 weeks and blood PhE levels monitored at least 1 a week

Factors to consider when people discontinue restricted diets
* Difficulty maintaining diet for older children
* State support of formula costs is decreasing
* In 1978 85% of PKU programs received financial backing, within 6 years 66% of people received financial support
* Formula Cost can range from $5,000 to $7,000 a year. For a young adult and families can be a problem financially if not receiving any support
* Therefore, when people do stop the restricted diet its important to consider and assess financial, nutritional, social, psychological problems that people encounter trying to maintain the diet. And remember that in some cases people don’t discontinue the diet because they want to they may be unable to.

Reference Page
Phenylketonuria (PKU)

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Case Study: Phenylketonuria (PKU)



Case Study: Phenylketonuria (PKU)
By: Bobby Orr
Adam Edwards
Danielle Heinbaugh

Introduction: What is PKU?
* PKU (Phenylketonuria) is a disorder defined as the inability to metabolize the essential amino acid phenylalanine
* This can cause mental retardation, if untreated, although sufficient treatment can occur immediately after birth

Symptoms:
* The main symptom consists of mild to moderate mental retardation, but this is easily prevented through treatment
* However, other side effects include seizures, vomiting, a “mousy odor”, and behavioral self-mutilation
* In some cases, treatment can reduce or reverse the mental retartadtion

The Guthrie Test:
* determines the phenylalanine level in the blood
* should be done on the second or third day of life
* is a screening test done to identify elevated phenylalanine levels it is not diagnostic
* PKU babies’ phenylalanine level is usually 20-40 mg/dl in comparison with normal levels of 4-6 mg/dl.

How the Guthrie Test works:
* Blood on filter paper is placed on agar plates with a strain of bacillus subtilis that requires phenylalanine for growth.
* The presence of growth is indicated by a halo surrounding the filter paper.
* If positive, blood phenylalanine and tyrosine levels are determined, and if elevated, a confirmatory assay for phenylalanine hydroxylase is done.

PKU Inheritance:
* Inherited as autosomal recessive disorder.
* Variation to classical symptoms is result of compound heterogeneity.
* 65 allelic variants make compound heterogeneity more common then homogeneity for the same allele.

Treatment of PKU:
* Phenylketonuria is treatable with a low phenylalanine diet.
* phenylalanine levels should be kept below 15 mg per deciliter
* Nutra sweet is especially high in phenylalanines

Genetic Counseling:
* Tell the parents that the baby will be normal if they follow the prescribed dietary guidelines
* The child is normally out of danger of the disease after puberty
* Phenylalanine should be avoided
o Stay away from nutra sweet, meats, dairy products

Case Study: Phenylketonuria (PKU)

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15 March 2010

Malaria



The Role of International Agencies in Conquering Malaria

Merozoite Surface Protein 1 Protects Aotus Monkeys Against Malaria

Immuno-epidemiology of malaria

Modeling vaccination strategies for developing countries

Vaccine Development and Recommendations

Malaria in Pregnancy

VACCINES: TECHNOLOGY TRANSFER TO THE DEVELOPING WORLD

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AIDS / HIV Vaccine Slides



HIV Vaccine Research

Finding a Cure: What HIV vaccine would you choose?

Duke Core Neutralizing Antibody Laboratory for AIDS Vaccine Research & Development

Difficulties associated with HIV vaccine

AIDS/ HIV – Current Senario

Sexually Transmitted Infections and HIV/AIDS

A CASE FOR EVOLUTIONARY THINKING: UNDERSTANDING HIV



Principles of Vaccination - AIDS vaccine

Viral Vectors For Vaccination Against Infectious Agents

The need for an HIV Vaccine - Motivating trials

AIDS supplement

Clinical HIV Vaccine Trials in the U.S. and Sub-Saharan Africa

Using Biomarkers in Vaccine Development and Evaluation

Vaccines Against Viral Infection

Challenges of modeling the HIV epidemic

Read more...

14 March 2010

Infertility: the role of the family doctor



Infertility: the role of the family doctor
By: Carroll Haymon, M.D.

Definitions 
    * Infertility = Inability of a couple practicing frequent intercourse and not using contraception to fail to conceive a child within one year.
    * Infertility affects 15-20% of couples, or 11 million reproductive age people in the U.S.

Causes of infertility 
    * Tubal pathology  35%
    * Male factor   35%
    * Ovulatory dysfunction 15%
    * Unexplained   10%
    * Cervical/other   5%

Counsel patience!
    * In normal young couples:
          o 25% conceive after one month
          o 70% conceive after six months
          o 90% conceive by one year
    * Only an additional 5% will conceive in an additional 6-12 months

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Genetically (devoid of RNA) Virus Particles as Drug Delivery Agent



Genetically (devoid of RNA) Virus Particles as Drug Delivery Agent




Scientists at John Innes Centre in Norwich, UK managed to create Cowpea mosaic virus particles that are missing their genetic material (devoid of RNA), turning them into drug ferrying containers that may prove useful against cancer and other localized diseases.

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Hematologic Complications of Pregnancy



Hematologic Complications of Pregnancy
By:Joseph Breuner, MD

outline
* Anemia
* Thrombophilias
* Thrombocytopenia

Case #1
* Anemia, pro’s and cons of treating
Which patients will benefit from iron treatment?
What hematocrit at 28 wks should generate attention?
* Dilutional or physiologic
* Iron Deficiency Anemia
* Thalassemias

Physiologic Anemia of Pregnancy
* Pregnancy-induced hypervolemia has several important functions:
1. To meet the demands of the enlarged uterus with its greatly hypertrophied vascular system.
2. To protect the mother, and in turn the fetus, against the deleterious effects of impaired venous return in the supine and erect positions.
3. To safeguard the mother against the adverse effects of blood loss associated with parturition.

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Psychiatric Complications of Pregnancy and the Postpartum



Psychiatric Complications of Pregnancy and the Postpartum
By:Joseph Breuner, MD
Swedish Family Medicine Residency

Objectives
    * Appreciate the postpartum period as a time of increased vulnerability to psychiatric illness
    * Recognize and diagnose psychiatric illness during pregnancy and the postpartum
    * Understand risks to the fetus of psychiatric medications
    * Prevent and treat psychiatric illness in pregnancy and the postpartum

Outline 1
    * Review DSM-IV diagnoses
    * Psychiatric illness during pregnancy
    * Psychiatric illness in the postpartum

But first, a review
DSM-IV Definition of...

    *   For at least one week (or less, if hospitalized) the patient's mood is
    *   abnormally and persistently high, irritable or expansive.
    *   To a material degree during this time, the patient has persistently had 3 or
    *   more of these symptoms (4 if the only abnormality of mood is irritability):
    *   -Grandiosity or exaggerated self-esteem
    *   -Reduced need for sleep

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12 March 2010

Finger pulse oximeter






A finger pulse oximeter measures a person’s blood oxygen saturation and pulse rate. They are widely used in the medical field and are also commonly used by pilots, athletes as well as people that work or train at high altitudes. A person’s entire body can be deprived of an adequate supply of oxygen, which is known as generalized hypoxia or simply a certain region of their body, commonly know as tissue hypoxia. This is a pathological condition that must be taken seriously and monitored. It is now easy and affordable to check your own heart rate and blood-oxygen saturation levels with a finger pulse oximeter.

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Concentration and detection of hepatitis A virus and rotavirus



Concentration and detection of hepatitis A virus and rotavirus in spring water samples by reverse transcription-PCR
By: Journal of Virological Methods 123 (2005) 163-169
Julie Brassard, Karine Seyer, Alain Houde, Carol Simard, Yvon-Louis Trottier
Presentation by Kristen M. Castro

What is Rotavirus?

* belong to the Reoviridae family.
* Seven major groups, groups A, B,C infect humans,
* group A most common and widespread
* cause vomiting and diarrhea 4-8 days, low grade fever
* common cause of severe diarrhea in children,
* kills around 600,000 children per year
* vaccines have been shown to be safe and effective in 2006
* genome consists of 11dsRNA segments surrounded by there-layered icosahedral protein capsid
* cause acute gastroenteritis AKA "Infantile diarrhea", "winter diarrhea", "stomach flu", "acute nonbacterial infectious gastroenteritis", and "acute viral gastroenteritis"
* infective dose is presumed to be 10-100 infectious viral particles
* infection can be acquired through contaminated hands, objects, or utensils
* Asymptomatic rotavirus is documented and may play a role in endemic disease.
* incubation period from 1-3 days
* Temporary lactose intolerance may occur
* people recover but severe diarrhea without fluid and electrolyte replacement could result in death
* Childhood death from rotavirus is low in the U.S.
* 100 cases/year, and reaches over 500,000 cases/year worldwide
* Association with other enteric pathogens may play a role in the severity
* viruses are transmitted via fecal-oral route
* usually through contaminates drinking water or food like raw shellfish, fresh fruit, vegetables, and ready to eat food

Rotavirus Why Do This Experiment?
* Rotavirus are stable under extreme conditions like pH, temperature and moisture
* resistant to disinfectants or wastewater treatments
* contribute to their existence in the environment
* contamination of wastewater, recreational water, drinking water, irrigation water, ground or subsurface water, is reportedly the primary source for gastro-enteritis or hepatitis outbreaks
* microbiological quality of water is based on quantitative methods for fecal bacterial like E. coli
* these indicators cant be used to predict contamination or presence of enteric viruses in the water
* water treatment systems are more or less adequate in detection and elimination of resistant enteric viruses
* must develop a method to detect enteric viruses and detect them at a low concentration

Materials and Methods Cell culture and virus
* Grown FRhK-4 and MA-104 cells in Eagles minimum essential medium
* Incubate cells w/o CO2 and grown to confluence
* human rotavirus strain Wa put into MA-104 cells, HAV strain HM-175 put into FRhK-4 cells
* cells were frozen and thawed 3 times and clarified using low speed centrifugation then divided into aliquots and stored at -70ºC

Materials and Methods Viral titration
* Tissue culture infectious dose (TCID) 50% method used to determine the titer of stock suspension and viral dilutions
* 96 well cell culture plates seeded with 2.0x10ˆ4 FRhK (HAV) per well and incubated for 24hrs at 37°C with 5% CO2
* cell infection performed by serial dilutions of HAV strain HM-175 were made in EMEM w/ supplements and 2% foetal bovine serum
* well plates washed with phosphate buffer saline (PBS)
* 50 uL viral dilution placed in 4 wells of a microplate w/ 175uL of maintenance medium
* plates incubated at 37°C w/ 5% CO2 and observed after 3-8 days

Materials and Methods Concentration and elution
* Spring water samples were inoculated with 1.0x10ˆ3 to 1.0x10ˆ-3 TCID50% of HAV and rotaviruses (conc. and elution step Fig 1)
* 100mL of viral dilution filtered through a positively charged Zeta Plus 60S filter to absorb virus
* to elute the virus from filter, 5mL of different eluents were used
* to the 5mL of eluate w/ viral particles, pH adjusted to 7.0-7.4, w/ 1N HCL
* re-concentration to 150 uL with Microsep 100
* retained concentrate was used for RNA extraction

Flow Chart of Concentration and Elution

Materials and Methods Extraction of viral RNA from water concentrates

* Virus concentrate incubated at 37°C w/ 1%SDS and 100ug of proteinase K for 1 hour
* 450uL of RLT buffer added to the concentrate and reheated at 56°C for 2 min, then 5 min room temp incubation
* 500uL of absolute ethyl alcohol added to the concentrate and vortexed for 15 mins
* suspension transferred to spin column in 700uL aliquots until lysate was loaded
* before elution step, column was washed 2 times
* RNA eluted 2 times w/ 30 and 20 uL of sterile RNAse free water
* viral RNA concentrated with SpeedVac
* viral RNA resuspended in a final volume of 5uL and kept at -70°C until use

Materials and Methods
RT-PCR

* Viral RNA extracted from inoculated water samples and heated at 98°C for 5 mins then chilling on ice
* 2 RT-PCR systems for the detection of the virus and 1 multiples RT-PCR were used for analyses
* Table 1 for sequences and localization's of oligonucleotides
* RT_PCR for each amplification system performed in 20uL reaction mixture with 2uL of extracted RNA using the Quiagen One Step RT-PCR
* amplification conditions used for the 226bp HAV fragment using prot. 1 and prot. 2 primers: 30 mins @ 50°C for reverse transcription step, 95°C for 15 mins for initial denaturation, 35 cycles for 45sec @ 94°C for denaturation, 45sec @ 47°C for annealing, 1 min @ 72°C for extension and final extension
* transcription and amplification conditions for RT-PCR were the same for rotavirus and multiplex HAV-rotavirus same as above, annealing temperatures (43°C) and final extension (5 mins) were different
* rotavirus, Rota-1 and End-9 primers were used for amplification of 268bp fragment
* UV light was used for amplified products after electrophoresis on a 2% agarose gel w/ EtBr


Primers and Probes Used
Materials and Methods Southern Blot
* RT-PCR products confirmed by Southern blot hybridization using internal oligoneucleotide probes (table 1)
* PCR products denatured and transferred from agarose gel to positively charged nylon membrane
* amplified DNA was crosslinked to membrane by 3 min exposure to UV light
* membrane was pre hybridized for 30 mins @ 55°C in hybridization solution w. 5x SSC0.1% N-laurylsarcosine, 0.02% sodium dodecyl sulfate (SDS), and 1% protein blocking reagent
* membrane was hybridized overnight in 50 pmol of labeled oligoneucleotide probe per milliliter
* membrane washed twice @ room temp for 5 mins in 2x SSC w/ 0.1% SDS and 2 times for 15 mins @ 55°C in 0.5x SSC w/ 0.1% SDS
* membrane incubated in blocking sln
* anti-DIG-peroxidase concentration of 75U/ml added to blocking sln
* membrane incubated 30 mins and washed 5 times in PBS
* positive result characterized by blue precipitate when peroxidase substrate was added to membrane

Results
Titration of HAV and rotavirus

* Before inoculation, water samples viral titer of HAV HM-175 and rotavirus Wa stock suspensions determined by TCID 50% method
* viral titers of HAV and rotavirus were 4.0x10ˆ7 TCID50%/ml and 1.25x10ˆ6 TCID50%/ml respectively
* titers of viral dilutions to inoculate spring water samples were determined and corresponded to estimated values
* titrations were performed in triplicate
Viral concentration and RNA extraction
* Adsorption of viral particles to the membrane due to electrostatic interactions between the viral capsid and the membrane
* larger filtration is possible and eliminate potential inhibitors of RT-PCR reaction increasing the detection of lower levels of viral particles in the water sample
* to increase yield of purified RNA of rotavirus the viral load was incubated prior to extraction step with 1% SDS and 100ug/ml of proteinase K
* due to a double capsid RNA rotavirus extraction is more difficult than others
* low yields of rotavirus were observed
* there was no beneficial effects or detriments on the RNA yield for HAV

Results
Detection limit of RT-PCR from experiments with artificially inoculated spring water samples
* 2 RT-PCR methods were used for detection of HAV and rotavirus
* “multiplex” RT-PCR used to detect HAV and rotavirus simultaneously
* analytical sensitivity was evaluated by using known titers of HAV and rotavirus in artificially inoculated samples of bottled water
* compared to the “multiplex” RT-PCR, the analytical sensitivity of the RT-PCR performed in the single mode was found to be at least 100 fold more sensitive for rotavirus (10ˆ-3 TCID50%/ml) and at least 10 fold more sensitive for HAV (10ˆ-1 TCID50%/ml)
* “multiplex” RT-PCR offers a detection of both viruses from a single amplification step with analytical sensitivities of at least 1 TCID50%/ml for HAV and at least 0.1 TCID50%/ml for rotaviruses

M=Molecular Ladder
N=Negative Control
P=Positive Control
M=Molecular Ladder
N=Negative Control
P=Positive Control (HAV and Rotavirus)
R=Positive Rotavirus Control

Results
Confirmation of RT-PCR results by Southern blot hybridization

* RT-PCR amplified fragments confirmed by Southern blot hybridization using specific primers (table 1)
* hybridization of the digoxigenin-labeled probes matched location of RT-PCR amplicons on the agarose gel

Discussion

* Due to viral outbreaks of HAV and rotavirus the confidence in the safety of the drinking water is disrupted
* bottle water per capita in the United States increased 9.4% in 1998 and grew by more than 50% since 1991 (source: Beverage Marketing Report)
* increase is due to the false conception that bottled water (spring or treated) is pure and does not contain any micro-organisms
* pilot study in Quebec City area said 56% of consumers drink bottled water on a regular basis
* spring or mineral water is defined by the Health Canadas Food and Drug Administration “bottled water derived from an approved underground water source and not from a public community water supply”
* spring water and mineral water even though treated for the removal of unwanted chemical and microbiological components can not be labeled as “natural”
* due to the packaging and distribution of bottled water that has not been treated for pathogenic microorganisms, there is a possibility of risk due to exposure from the presence of these microorganisms
* European study shows in 3 brands of bottled drinking water, detection of 53 noroviruses out of 159 samples tested (33 percent)
* RNA signals were detected after 1 year of storage
* it is beneficial, for the public, to make available a new test to detect enteric viruses in water
* quality controls are based on routine monitoring of fecal contamination with bacterial indicators like fecal coliforms, coliforms, and E. coli
* there is no correlation that can be established between the presence of bacterial indicators and the presence of enteric viruses
* due to low quantities of viral presence, methodologies must be designed to detect the viruses at low levels
* use of positively charged membranes have been integrated in efficient virus concentration systems such as noroviruses, rotaviruses, hepatitis A, poliovirus, and coxsackievirus
* the method in this study allows for detection of a viral particle (concentrate the total viral load) present in the water sample and obtain a detection limit of 0.001 TCID50%/ml for rotavirus and 0.1 TCID50%/ml for HAV
* In contrast to immunocapture technology, a charged membrane enables the concentration of all viral particle types present in the sample
* RT-PCR in the study for detection of HAV and rotavirus gives a better analytical sensivity than the multiplex
* multiplex system has the advantage of detecting both viruses simultaneously at levels of 1 TCID50%/ml for HAV and 0.1 TCID50%/ml for rotavirus
* multiplex approach is less expensive for detection of enteric viruses in large amounts of bottled water
* single RT-PCR approach is the method of choice for detection of single virus types in lower concentrations
* water samples can be processed in 8 hours from concentration step up to detection of targets on agarose gel
* the system could be expanded to include other waterborne enteric viruses
* can be used to concentrate any vial particle from a water sample and eliminate time of interference in the molecular amplification process
* extracted RNAs can be used in different molecular detection systems like RT-PCR, PCR (DNA viruses), nucleic acid sequence based amplification (NASBA) and Quantitative Real-Time PCR

* Routinely monitoring of enteric viruses that contaminate spring or mineral bottled water, underground or subsurface water, should be considered by manufactures as an important monitor of bacterial indicators for protecting the consumer and the general population for protection against pathogens associated with the viruses

Concentration and detection of hepatitis A virus and rotavirus.ppt

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Infection



Infection

General points: A general listing of different viral diseases that affect different organs of the body.
Viruses infect specific Organisms Tissues. Effects can range from Unnoticeable Deadly

Routes of viral entry

Respiratory tract diseases
Virus induced respiratory infections kill about 1 million children each year as well as a significant number of older adults.

* Many of the viruses that infect only the respiratory tract do not induce a strong immune response and hence reinfection with the same or a similar strain is common.
* Children get about 6 colds a year and adults get 2-3 per year.
* Deaths from respiratory infections: approx. 4.4 x 106/yr for Bact. and viruses world wide.
* Influenza- 20,000 deaths/yr in US during epidemic years (most years), Spanish flu of 1918, 500,000 in US 20 x 106 worlwide, Hong Kong outbreak 68-69, 34,000 in US.
* Human Respiratory Syncytial Virus- 4,500 deaths/yr (children) in US.

Respiratory tract diseases
* Rhinitis (Common Cold)-watery nasal discharge and obstruction, sneezing, mild sore throat and coughing but little or no fever. Infection based in upper respiratory. Sometimes complicated by superinfection with bacteria.

* Pharyngitis (most are viral)-sore throat, malaise, fever, sometimes cough. Infection based in pharynx. Can be caused by many of the same agents that cause common colds. RSV and adenovirus are prominent causes in young children and Herpes type viruses in young adults.

* Laryngotracheobronchitis (Croup)-fever, barking or metallic cough, respiratory distress, sometimes complete laryngeal obstruction. Most common causes are influenza and parainfluenza virus.

Respiratory tract diseases

* Bronchiolitis-Rapid and labored breathing, persistent cough, wheezing, cyanosis, variable amount of atelectasis, marked emphysema. Major causes are Influenza, parainfluenza, and RSV especially in young children. RSV can develop virtually overnight causing SIDS in young children.

* Pneumonia-often develops following upper resp. tract infection. Febrile, some cough, degree of dyspnea, wheezing, moist rales. X-rays often show only scattered areas of consolidation and diffuse lesions unlike pronounced lesions and consolidated areas in bacterial pneumonia. RSV, Influenza, parainfluenza, adenoviruses are major causes. A major cause of death to older people and young children. RSV is the major respiratory pathogen in young children and kills 4,500 children a year in the U.S. alone.

Viral Gastroenteritis

* Inflammation of the stomach and intestines
* Usually manifested as diarrhea which is watery but not bloody in the case of viral infection.
* Fever and Vomiting common with some infectious agents.
* Diarrheal diseases kill 3 million children each year mostly in developing countries.
* Rotaviruses are the main culprits and are responsible for most of the deaths.
* Astroviruses and Caliciviruses (Norwalk virus) can also cause diarrhea.

Central Nervous system diseases
* Most result as rare complication of primary infections elsewhere in the body.
* Viruses may be
o neuroinvasive (able to enter the nervous system) and/or
o neurovirulent (cause nerve damage).
o e.g. Mumps is highly neuroinvasive but not very neurovirulent while herpes is just the opposite.
* Viruses cause disease in a variety of ways
o infection of a specific area (Ammon's horn with rabies, and temporal lobes with HSV)
o Broad infection.
* Some lyse neurons while some cause demyelination of axons.

Central Nervous system diseases
* Deaths - Measles which can cause a variety of brain infections kills about 1 million/yr worldwide, mostly in area without vaccination.

* Meningitis-Infection of meningeal cells. Viruses are major cause but viral infection is much less severe than bacterial with full recovery likely. Headache, Fever, and neck stiffness with/or without vomiting and photophobia are symptoms. Mumps and Enteroviruses are most common agents.

* Paralysis-Mostly from poliovirus in countries where the virus has not been eradicated. Poliomyelitis involving demyelination of nerve cells.

* Encephalitis-Fever, headache, neck stiffness, vomiting, alterations in state of consciousness indicating involvement of brain parenchymal tissue. Patient is lethargic and confused and seizures, or paralysis may develop before coma and death. Postinfectious Encephalitis- Occurs a few days after infection of children with measles, mumps, or varicella. Severe demyelination is observed and prognosis is grim.

Central Nervous system diseases
* Guillain-Barre syndrome- Demyelination is common finding. Most frequently caused by EBV infection and appearing 1-4 weeks after mononucleosis infection. Most recover completely but 15% have residual nerve damage.

* Reye's syndrome - Cerebral edema without inflammation is common symptom. 25% of cases are fatal. Follow influenza or chickenpox infection in children and seems to be an association between syndrome and aspirin administration.

* AIDS Dementia Complex - Results from destruction of nerve cells often late in AIDS syndrome. Direct destruction of nerve cells and demyelination are involved.

Skin Rashes
* Macular-Flat colored spots;
* Papular-Slightly raised containing no expressible fluid;
* Vesicles-blister with clear fluid from which virus can be isolated;
* Pustular- Blisters containing puss;
* Nodular- Generally warts.

Hemorrhagic fever
* A variety of diseases that share the common feature of widespread hemorrhages from the bodies epithelial tissue including internal mucosa such as the gastrointestinal tract and the skin.
* A variety of internal damage is often associated with the different diseases.
* Hanta virus for example causes severe renal necrosis.
* Other agents (Ebola and Yellow fever virus) cause severe liver damage.
* Many have high fatality rates.

Genitourinary infections
* Herpes simplex virus 2 and Papillomaviruses are the major viruses infecting the genital area.
* Sexual transmission is the main way of acquiring the agent.
* Herpes manifests as painful itchy ulcerated vesicular lesions occasionally accompanied by fever and malaise especially in woman. Spread to the central nervous system occurs in 10% of cases with mild meningitis resulting. Recurrences are common although generally less severe than the initial infection.
* Papillomaviruses: Genital warts. Warts appear as external condyloma and usually disappear without treatment within a couple of years. Certain types of HPV may progress over several years through stages of cervical intraepithelial neoplasia (CIN) to invasive squamous cell carcinoma.
* HIV: Deaths by HIV-about 1 million/yr worldwide, 20,000/yr in US although was much higher before triple drug therapy

Eye diseases
* A number of common childhood viral diseases can involve conjunctivitis
o Inflammation of the conjunctiva which is the transparent membrane covering the sclera i.e. white of the eye and the inner eyelid).
o Results in redness, discomfort and discharge and is commonly called pink eye. Some types are particularly dangerous, especially those involving the cornea (keratoconjunctivitis).
* HSV is the commonest infectious agent that causes blindness in the Western world.
* A number of eye diseases, e.g. cataracts, glaucoma, and retinopathy are associated with congenital rubella syndrome and cytomegalic inclusion disease of infants.

Viral arthritis
* Stiff and painful joints.
* Usually accompanied by fever and myositis (inflammation of muscle tissue causing pain tenderness and weakness)
* Can occur with or without rash.
* Rarely persists for more than a few weeks.
* Major causative agents are certain toga-, flavi-, and bunyaviruses (arboviruses).
* It has been hypothesized that rheumatoid arthritis may have a viral origin.

Viral Carditis
* Myocarditis = inflammation of the heart muscle
* Pericarditis = inflammation of pericardium membrane that encloses he heart
* Cardiomyopathy = diseases causing reduction in the force of the heart
* Associated with certain enteroviruses (family of picornaviruses), most notably coxsackie B virus.
* Infections often reoccur, leading to permanent myocardial damage, cardiomegaly (enlarged heart), or congestive cardiac failure.

Viral Hepatitis
* Inflammation of the liver with accompanying liver cell damage.
* 20-30 cases per 100,000 people per year in the U.S.
* Symptoms :jaundice often proceeded by flu-like illness.
* Liver failure can occurs.
* Can become chronic depending on the infectious agent and cirrhosis
* Transmission:
o parenteral (needle infection usually),
o perinatal (occurring just before or after birth),
o sexual, or enteric (via gut cells).
* 5 viruses known to infect the liver as the primary organ. Other viruses can also cause hepatitis e.g. Herpes viruses and some viruses causing hemorrhagic fever.
* Deaths- Hepatitis B is the most common killer killing 2 million/yr worldwide and 5000/yr in US.

Viral pancreatitis and diabetes
* Mumps infection can be complicated by severe pancreatitis (inflammation of the pancreas).
* Can also be caused by certain other enteroviruses.
* There is some evidence that viral infections triggers insulin-dependent juvenile diabetes mellitus.

Chronic fatigue syndrome
* Characterized by extreme fatigue.
* EBV, Coxsackie B, CMV, and HTLV are among the many viruses to be isolated from such patients
* Importantly, no cause-effect relationship has been established

Congenital and Perinatal Infections
* Include a variety of diseases acquired
o Prenatally,
o Intrapartum (during birth process) or
o Postnatally within the first few weeks.
* Can be particularly dangerous since the newborn is not protected by the mothers antibodies

Infection.ppt

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Bacterial Diseases



Bacterial Diseases

A. Airborne Bacterial Diseases
B. Foodborne & Waterborne Bacterial Diseases
C. Soilborne Bacterial Diseases
D. Arthropodborne Bacterial Diseases
E. Sexually Transmitted Bacterial Diseases
F. Miscellaneous Bacterial Diseases

V. A. Airborne Bacterial Diseases

1. Streptococcal Diseases
2. Diphtheria
3. Pertussis
4. Meningococcal Infections
5. Haemophilus influenzae Infections
6. Tuberculosis
7. Pneumococcal Pneumonia
8. Primary Atypical Pneumonia
9. Legionellosis

Foodborne & Waterborne Bacterial Diseases

1. Foodborne Intoxications vs Infections
2. Botulism
3. Staphylococcal Food Poisoning
4. Clostridial Food Poisoning
5. Typhoid Fever
6. Salmonellosis
7. Shigellosis
8. Cholera
9. Diseases associated with Escherichia coli
10. Camphylobacteriosis and Helicobacteriosis

Soilborne Bacterial Diseases

1. Anthrax
2. Tetanus
3. Gas Gangrene
4. Leptospirosis
5. Listeriosis

Arthropodborne Bacterial Diseases

1. Plague
2. Lyme Disease
3. Rocky Mt. Spotted Fever
4. Epidemic Typhus
5. Endemic Typhus

Sexually Transmitted Bacterial Diseases

1. Syphilis
2. Gonorrhea
3. Chlamydia
4. Chanchroid

Miscellaneous Bacterial Diseases

1. Leprosy
2. Staphylococcal Infections
3. Pseudomonas aeruginosa Infections

Bacterial Diseases .ppt

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09 March 2010

Surgical Emergencies in the Newborn



Surgical Emergencies in the Newborn
University of North Carolina at Chapel Hill
Pediatric Surgery Division
Patty Lange

Emergencies
* Types
o Airway/Respiratory
o Intestinal Obstruction
o Intestinal Perforation
* Signs
o Respiratory distress
o Abdominal distension
o Peritonitis
o Pneumoperitoneum

Airway/Respiratory
* Neck Masses
* Thoracic masses/pulmonary lesions

Cystic Hygroma
* Multiloculated cystic spaces lined by endothelial cells
* Incidence about 1 in 12,000 births
* Complications
* Treatment
* Postnatal overdistension of one or more lobes of histologically normal lung
* Location

Congenital Lobar Emphysema
* Diagnosis
* Treatment

Congenital Cystic Adenomatous Malformation (CCAM)
* Mass of cysts lined by ciliated cuboidal or columnar pseudostratified epithelium
* Three types
* More common on the left side, 2% bilateral

CCAM
* Diagnosis
* Treatment
Congenital Diaphragmatic Hernia
* Intro
* DX
* Treatment
Tracheoesophageal Fistula and Esophageal Atresia
Intestinal Obstruction
Anatomic Differentiation
* Upper GI
* Lower GI
Anatomic Differentiation
Urgency to Treat
* Emergencies
* Further workup
Common Disorders
* NEC
* Duodenal Atresia
* Small Bowel Atresia
* Malrotation/Volvulus
* Hirschsprung’s
* Presentation

NEC Treatment
* Medical
* Surgical indications
NEC Outcomes
* Overall survival ~ 80%, improving in LBW
* In pts w/perforation, 65% perioperative mortality, no perf--30% mortality
* 25% of Survivors develop stricture
* 6% pts have recurrent NEC
* Postop NEC--Myelomeningocele, Gastroschisis--45-65% mortality

Pneumatosis
Pneumoperitoneum
NEC--Abd Distension/Erythema
Necrotic Segment Ileum
Resection
Specimen--Ileocecectomy
Ileostomy
Common Disorders
* NEC
* Duodenal Atresia
* Small Bowel Atresia
* Malrotation
* Hirschsprung’s

Duodenal Atresia
* Incidence--1 in 5,000 to 10,000 live births
* 75% of stenoses and 40% of atresias are found in Duodenum
* Multiple atresias in 15% of cases
* 50% pts are LBW and premature
* Polyhydramnios in 75%
* Bilious emesis usually present
* Associated Anomalies

Duodenal Atresia Diagnosis
* Radiographs
* Workup of potential associated anomalies
“Double Bubble”
Duodenal Atresia Treatment
* Nasogastric decompression, hydration
* Surgery
Common Disorders
* NEC
* Duodenal Atresia
* Small Bowel Atresia
* Malrotation
* Hirschsprung’s

Small Bowel Atresia
* Jejunal is most common, about 1 per 2,000 live births
* Atresia due to in-utero occlusion of all or part of the blood supply to the bowel
* Classification--Types I-IV
* Presents w/bilious emesis, abd distension, failure to pass meconium (70%)

Intestinal Atresia Classification
* Associated Anomalies
o other atresias
o Hirschsprung’s
o Biliary atresia
o polysplenia syndrome (situs inversus, cardiac anomalies, atresias)
o CF (10%)

Atresia--Diagnosis and Treatment
* Plain films show dilated loops small bowel
* Contrast enema shows small unused colon
* UGI/SBFT shows failure of contrast to pass beyond atretic point
* Treatment is surgical

Common Disorders
* NEC
* Duodenal Atresia
* Small Bowel Atresia
* Malrotation/Volvulus
* Hirschsprung’s

Malrotation
* 1 per 6,000 live births
* can be asymptomatic throughout life
* Usually presents in first 6 months of life
* 18% children w/short gut had malrotation with volvulus
* Etiology
o physiologic umbilical hernia--4th wk gestation
o Reduction of hernia 10th - 12th wks of gestation

Normal Embryology
Malrotation Classification
* Nonrotation
* Abn Rotation of Duodenojejunal limb
* Abn rotation of Cecocolic limb

Abnormal Rotation/Fixation
Malrotation Diagnosis
* Varying symptoms from very mild to catastrophic
* **Bilious emesis is Volvulus until proven otherwise**
* Bilious emesis, bloody diarrhea, abd distension, lethargy, shock
* UGI shows abnormal position of Duodenum
o if Volvulus, see “bird’s beak” in duodenum

Malrotation UGI
Intraop Volvulus
Bowel Necrosis--Volvulus
Malrotation--Treatment
* Surgical--Ladd’s Procedure
Common Disorders
Hirschsprung’s Disease
* Migratory failure of neural crest cells
* Incidence 1 in 5,000 live births, males affected 4:1 over females
* 90% of pts w/H’sprung’s fail to pass meconium in first 24-48 hrs
* Abd distension, bilious emesis, obstructive enterocolitis
Hirschsprung’s Diagnosis
* Barium Enema
* Anorectal Manometry
* Rectal Biopsy

Transition Zone on BE
Hirschsprung’s Treatment
Pull-Through Procedure
Summary
* BILIOUS EMESIS IS VOLVULUS UNTIL PROVEN OTHERWISE
* Signs of surgical emergency
o free air, abd wall cellulitis, fixed loop on xray, rapid distension, peritonitis, clinical deterioration
* History and plain films will guide sequence of additional studies
* Remember associated anomalies

Surgical Emergencies in the Newborn.ppt

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Pediatric Minimally Invasive Surgery



Pediatric Minimally Invasive Surgery
By:Joseph A. Iocono, M.D.
Assistant Professor
Division of Pediatric Surgery
University of Kentucky
Children’s Hospital

Large Operations with Tiny Incisions
Lap Hirschsprung’s pull through 8 weeks post-op pull through

MIS-Advantages
* Cosmesis
+ open operations often leave large, unsightly incisions
+ with some laparoscopic instruments smaller than 2mm in size, it is often difficult to see incisions postoperatively
* Analgesia
o Smaller incisions associated with less pain, lower analgesic use, and quicker recovery.
+ few controlled studies in children, especially in youngest patients
* Adhesions
o several studies suggest the formation of fewer intra-abdominal adhesions after laparoscopic procedures
+ reduces the risk of future postoperative bowel obstructions
+ possibly reduces postoperative pain
* Decreased Ileus
+ Nissen, Appendectomy, Pyloromyotomy, Bowel resection, Spleen
+ Real or perceived?

Pediatric Surgery and MIS
Pediatric Surgeons—already “in the business”
o Small incisions--small scars
o Preemptive anesthesia--decreased pain med needs
o Short hospital stays
o Laparoscopic Cholecystectomy
o Laparoscopic Pyloromyotomy
o First true pediatric MIS procedure
o Laparoscopic appendectomy
o Laparoscopic Nissen Fundoplication
o Laparoscopic Splenectomy

MIS—What’s So Great?
* Why Bother?
o Additional expense
o Prolonged procedures
o Lack of tactile evaluation
o Loss of depth perception
o Complications specific to MIS
“After an advanced MIS case, the patient goes home and the surgeon goes to the ICU”
* Expense
* Length of Procedures
From Curiosity to Standard of Care—How?
o Procedure Driven
o Patient (parent) Driven
o Technology Driven
o Physician Driven
o Care Driven --“re-think” care

Technology – Smaller and Better
Ligation Monopolar Bipolar, harmonic
Instruments 10 mm 3 mm (disposable) (reusable)

Technology
MIS – Indications
* General Indications
* New procedures Developed rapidly
Partial list of described MIS procedures in Children
Achalasia (1) Adhesive Small Bowel Obstruction
Adrenal Tumors (1) Appendicitis (25)
Biliary Atresia Cholelithiasis (5)
Chronic Abdominal Pain (2) Chronic Constipation (ACE procedure) (5)
Crohn’s Disease (2) Diaphragmatic Hernia (1)
Duodenal Atresia Empyema
Gastroesophageal Reflux (25) Gastrostomy Tube Placement (20)
Hirschsprung’s Disease (2) Benign Kidney Disease
Lung tumor (4) Malrotation (1)
Meckel’s Diverticulum Mediastinal Pathology (1)
Ovarian Torsion and Cysts (2) Pancreatic Pseudocyst
Pectus Excavatum (4) Placement of VP Shunt
Pyloromyotomy (32) Recurrent Pneumothorax (1)
Splenic Pathology (5) Tracheoesophageal Fistula
Undescended Testicle (6) Ulcerative Colitis (1)
Urinary Reflux Inguinal Hernia (recurrent) (1)
Patent ductus arteriosus Peritoneal Dialysis access

MIS in Pediatric Surgery
* Indications
* Procedure
* Complications
* Changes in Care
* Controversies
* Cholecystectomy
* Nissen Fundoplication
* Appendectomy
* Splenectomy
* Intestinal Resection
* VATS
* Inguinal Hernias
* Pyloromyotomy
* Hirschsprung’s Pull Through
* Ladd’s Procedure
* Pectus Excavatum- Nuss Procedure
* Congenital Diaphragmatic Hernia

Cholecystectomy--1991

* Indications
* Procedure
* Complications
* Changes to Care
* Controversies
* Gold Standard
* Complications
* Changes to Care
* Controversies

Port size/use
1. 5mm--camera
2. 3mm--liver retractor
3. 5mm--dissection (G-tube)
4. 3mm--dissection
5. 3mm---retraction (optional)

Appendectomy--1992
* Indications
* Procedure
* Complications
* Changes to Care
* Controversies

Splenectomy--1998
* Indications
* Procedure
* Complications
* Changes to Care
* Controversies

Intestinal Resection
* Indications
* Procedure- 2 ways
* Complications
* Changes to Care
* Controversies
Optional Incisions
Thoracoscopy-VATS
* Indications
o Empyema Blebs
o Wedge Biopsy Anterior Spine
o Mediastinal cysts Thymectomy
* Procedure
o 3 ports, low pressure CO2
* Complications
o Conversion rate high
* Changes to Care
o Insufflation better
o Faster recovery
o Start chemo earlier
* Controversies
o Ability to “feel’ lung.

Inguinal Hernias
* Indications
* Procedure
* Complications
* Changes to Care
* Controversies

Pyloromyotomy-1991
* Indications
* Procedure
* Complications
* Changes to Care
* Controversies

Pull-through for Hirschsprung’s--1995
* Indications
* Procedure
* Complications
* Changes to Care
* Controversies

Ladd’s Procedure for Malrotation--1997
* Indications
* Procedure
* Complications
* Changes to Care
* Controversies

Nuss Procedure for Pectus Excavatum --1995
* Indications
* Procedure
* Complications
* Changes to Care
* Controversies
o Need for scope?

Diaphragmatic Hernia
* Indications
* Procedure
* Complications
* Changes to Care
* Controversies

Pediatric Minimally Invasive Surgery
* Conclusions
o Surgeon must decide whether a minimally invasive approach is the safest and most appropriate procedure.
o Must convert to an open procedure at any time that the risks are greater than those of the open technique.
o Must increase his/her repertoire of MIS cases as skills improve.
o Must stay informed about new techniques, tools, and indications and complete CME in order to gain needed training.

Teaching Minimally Invasive Surgery
* Education
* Solution--basic skills need to be mastered

Who gets MIS Procedures and
When do I refer to Pediatric Surgery?
* Who?
* When?
* How?

Future Directions
* Limitations of current MIS technology
* Solution---daVinci operative system
* Ready for Pediatric MIS? Yes Infant MIS? Not quite

Final Thoughts
“Five years ago it would have been unthinkable that an [entire] issue of Seminars in Pediatric Surgery would be discussing intracorporeal anastomoses after intestinal resections and laparoscopic pull-through for high imperforate anus. Yes it is likely that we are only in the infancy of the development of laparoscopic surgery in our patients…Several pediatric surgeons are involved with experimentation and development with robotic surgery…Certainly, it will make intestinal anastomoses easier and make [more complicated] procedures such as portoenterostomy [Kasai procedure] more feasible.”

Pediatric Minimally Invasive Surgery.ppt

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The Liver and the Biliary Tract



The Liver and the Biliary Tract
By:Brando Cobanov, M.D.
Department of Pathology
UMDNJ-RWJMS

Hepatic Injury
* Inflammation = hepatitis
o Portal tracts, lobules
* Degeneration
o Damage from toxic or immunologic insult
o Accumulation of substances, e.g., steatosis
* Cell death
o Centrilobular, submassive, massive necrosis
* Fibrosis
o Usually irreversible
* Cirrhosis

Bile
Jaundice
* Excessive production of bilirubin
o Hemolytic anemias, ineffective erythropoiesis
* Reduced hepatic uptake
* Impaired conjugation
o Physiologic jaundice of the newborn
o Crigler-Najjar syndromes types I and II
o Gilbert syndrome
o Viral or drug-induced hepatitis, cirrhosis
* Decreased hepatocellular excretion
o Dubin-Johnson syndrome, Rotor syndrome
* Impaired bile flow

Cholestasis
* Systemic retention of not only bilirubin but also other solutes eliminated in bile, particularly bile salts and cholesterol
* Due to hepatocellular dysfunction or biliary obstruction
* Accumulation of bile pigment within the hepatic parenchyma – Kupffer cells
* Bile ductular proliferation
* Bile lakes
* Portal tract fibrosis

Hepatic Failure
Clinical Features
* Jaundice
* Hypoalbuminemia
* Hyperammonemia
* Fetor hepaticus
* Palmar erythema
* Spider angiomas
* Hypogonadism
* Gynecomastia

Complications
* Multiple organ failure
* Coagulopathy
* Hepatic encephalopathy
* Hepatorenal syndrome

Cirrhosis
* Bridging fibrous septa
* Parenchymal nodules
* Disruption of the architecture of the entire liver
* Etiologies

Portal Hypertension
* Prehepatic
* Intrahepatic
* Posthepatic

Clinical Sequelae
* Ascites
* Portosystemic venous shunts
* Splenomegaly
* Hepatic encephalopathy

Drug Induced Liver Disease
* Liver is the major drug metabolizing and detoxifying organ in the body
* Direct toxicity
* Hepatic conversion of a xenobiotic to an active toxin
* Immune mechanisms
* Table 16-6

Alcoholic Liver Disease
* Hepatic steatosis
* Alcoholic hepatitis
* Alcoholic cirrhosis
o Micronodular

Pathogenesis
* Shunting of normal substrates away from catabolism toward lipid biosynthesis
* Induction of cytochrome P-450
* Free radicals generated by microsomal ethanol oxidizing system
* Alcohol directly affects microtubular and mitochondrial function
* Acetaldehyde induces lipid peroxidation
* Neutrophil infiltration
* Immunologic attack of hepatocytes

Causes of Death
* Hepatic failure
* Massive GI hemorrhage
* Infection
* Hepatorenal syndrome
* Hepatocellular carcinoma

Nonalcoholic Fatty Liver
* Elevated serum aminotransferase levels
* Low risk for development of hepatic fibrosis or cirrhosis
* Associated with obesity, type 2 DM, hyperlipidemia
* Need to exclude other causes


Hemochromatosis
* Primary or hereditary
* Secondary
Pathogenesis
Morphology
Clinical Features
Wilson Disease
Morphology
Clinical Features
α1-Antitrypsin Deficiency
Morphology
Neonatal Hepatitis
Reye Syndrome
Morphology
Obstructive Biliary Tract Disease
Secondary Biliary Cirrhosis
Primary Biliary Cirrhosis
Primary Sclerosing Cholangitis
Circulatory Disorders
Hepatic Artery Inflow
Portal Vein Obstruction
Impaired Blood Flow Through the Liver
Hepatic Vein Thrombosis
Veno-Occlusive Disease
Hepatic Neoplasms
Benign Tumors
Focal Nodular Hyperplasia
Liver Cell Adenoma
Hepatocellular Carcinoma
Pathogenesis
Morphology
HCC
Clinical Features
Disorders of the Gallbladder
Cholelithiasis
Clinical Features
Cholecystitis
Choledocholithiasis
Cholangitis
Biliary Atresia
Gallbladder Carcinoma
Cholangiocarcinoma

The Liver and the Biliary Tract.ppt

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28 February 2010

Trauma: Stabilization and Transport



Trauma: Stabilization and Transport
Division of Critical Care Medicine
Children’s Healthcare of Atlanta
Atlanta, Georgia

Trauma:Stabilization and Transport
Objectives
* Discuss the epidemiology of pediatric trauma
* Review the primary survey
* Identify priorities in care
* Discuss differences between adult & pediatric trauma
* Discuss pediatric trauma management
* Review the development of and
guidelines for transport

Neurosurgeon
Resuscitation Team
Surgical Specialties
Medical Specialties
Nursing
ICU
OR
Anesthesia
Orthopedic Surgeon
Trauma Surgeon
ALWAYS OPEN TRAUMA CENTER

Trauma:Initial Stabilization
Trauma:Initial Stabilization
The Golden Hour
* R. Adams Cowley, MD
* Care within 60 min.
* mortality if care given > 60 min.
"You live or die depending on where you have your accident because they take you to the nearest hospital!"

R. Adams Cowley, MD
“In the Blink of an Eye”
A-M-P-L-E History

A - Allergies
M - Medications
P - Previous history
L - Last ate
E - Events of accident

Trauma:Initial Stabilization Management of Multiple Trauma
* Primary survey
* Initial stabilization
and resuscitation
* Secondary survey
* Definitive care

Trauma:Initial Stabilization The Primary Survey
* A rapid initial assessment
* An "ABC" approach
* Resuscitation done simultaneously

Trauma:Initial Stabilization The Secondary Survey
* After the "ABCs"
* Head to toe examination

Trauma Initial Stabilization Definitive Care Phase
* Overall management
* Fracture stabilization
* Stabilization/transport
* Emergent surgery

Trauma:Initial Stabilization Pediatric Considerations
* ABCs
* Differences:
1) Size
2) Injury pattern
3) Fluids
4) Surface area
5) Psychological
6) Long term effects

Trauma:Initial Stabilization
In pediatric trauma, you don’t just have and injured child, you have an injured family
M. Eichelberger, MD
“In the Blink of an Eye”
Trauma:Initial Stabilization The Primary Survey
A - Airway and C-Spine
B - Breathing
C - Circulation (with hemorrhage control)
D - Disability
E - Exposure

Trauma:Initial Stabilization The Primary Survey
* Airway:
o Establish patency
o Beware C- Spine
o Do not:
+ Flex
+ Hyperextend
* Oxygen
o treat potential hypoxemia
o all trauma patients get O2

Trauma:Initial Stabilization Pediatric Considerations
* Craniofacial disproportion
* "Sniffing" position
* Obligate nose breathers
* Anatomy
o tongue
o larynx
o trachea

Trauma:Initial Stabilization Suspected Airway Obstruction
* Stridor
* Cyanosis
* Absence of breath sounds
* Dysphagia, snoring, gurgling
* Altered mental status
* Trauma to head, face, neck

Trauma:Initial Stabilization Cervical Spine Differences
* Flexible interspinous ligaments
* Underdeveloped neck muscles
* Poorly developed articulations
* Anterior vertebral bodies
* Flat facet joints
* Large head to BSA

Trauma:Initial Stabilization Cervical Spine
* Predisposed to serious high cervical injuries
* Assume its presence in:
o Blunt injury above clavicle
o Multisystem trauma
o Significant injury - MVA, fall
o Altered sensorium

Trauma:Initial Stabilization Cervical Spine: Radiographs
* Pseudosubluxation
* distance dens and C-1
* Growth plate fracture
* SCIWORA

Trauma:Initial Stabilization Airway Management
* Clear airway
* Jaw thrust/stabilization maneuver
* Oral/nasal airway
* Oxygenate/ventilate
* Intubation
* Cricothyroidotomy

Trauma:Initial Stabilization C-Spine Immobilization
* Backboard
* Appropriate C-collar
* Snadbags or towel
* Tape
* Torso immobilization

Trauma:Initial Stabilization Primary Survey: Breathing
* Assess via
o Exposure
o Rate/depth of respiration
o Inspection/palpation
o Quality/symmetry of breath sounds

NB: An intact airway Does Not assure adequate ventilation!!

* Oxygen
* Assisted ventilation
* Alleviate life threatening injuries

Thoracic Injury Heart, Lung, Mediastinum
* Penetrating
o Sucking, Bubbling
o Hemopneumothorax
o Tamponade
* Blunt
o Flail Chest
o Contusion (lung, heart)
o Aortic Dissection
o Tracheal Rupture
o Diaphram Rupture

Trauma:Initial Stabilization Chest Trauma
* Tension pneumothorax
* Hemothorax
* Flail chest
* Cardiac tamponade

Trauma:Initial Stabilization Chest Trauma
* Blunt injury common
* More compliant chest wall
* Sensitive to flail segment
* Mobile mediastinum
* Major vascular injury uncommon

Trauma:Initial Stabilization Tension Pneumothorax
* Air in the pleural space without exit
* Collapse of ipsilateral lung
* Compressed contralateral lung
* Mediastinal shift

Trauma:Initial Stabilization Tension Pneumothorax: Signs and Symptoms
* Respiratory distress
* Unilaterally diminished breath sounds
* Hyperresonance on affected side
* Tracheal deviation
* Distended neck veins
* Cyanosis

Trauma:Initial Stabilization Tension Pneumothorax: Treatment
* Needle decompression
o 2nd intercostal space mid-clavicular line
* Chest tube
o 4-5th intercostal space mid-axillary line

Trauma:Initial Stabilization Hemothorax: Signs and Symptoms
* breath sounds on affected side
* Dullness to percussion
* Hypovolemia
* Flat vs distended neck veins

Trauma:Initial Stabilization Hemothorax: Treatment
* Fluids/blood
* Decompression
* Chest tube
* Autotransfusion

Trauma:Initial Stabilization Flail Chest
* Boney discontinuity of the chest wall
* Major problem = underlying injury
* Signs and symptoms
o respiratory distress
o paradoxical chest wall movement
o severe chest pain

Trauma:Initial Stabilization Flail Chest:Treatment
* Oxygen
* Stabilize segment
* Re-expand lung
* + intubation
* Give fluids cautiously

Trauma: Initial Stabilization abdominal trauma
* Following the head and extremities, the abdomen is the third most commonly injured anatomic region in children
* significant morbidity and may have a mortality rate as high as 8.5%
* abdomen is the most common site of initially unrecognized fatal injury in traumatized children

Trauma: Initial Stabilization abdominal trauma
* Why more prone to abdominal injury
o child has thinner musculature
o ribs are more flexible in the child
o solid organs are comparatively larger in the child
o fat content and more elastic attachments leading to increased mobility
o bladder is more exposed to a direct impact to the lower abdomen

Intraperitoneal Hemorrhage Management
o Immediate surgical exploration
o Non-operative protocols
+ successful in more than 95% of blunt abdominal trauma in appropriately selected cases

Intraperitoneal Hemorrhage
Immediate Surgical Exploration
o Abdominal distention + “shock”
o Transfusion requirement > 40 cc/kg
o Peritonitis
o Pneumoperitoneum
o Bladder rupture

Intraperitoneal Hemorrhage
CT Scan
o Hemodynamically stable
o Unreliable exam
o Immediate non-abdominal surgery
o Specific Indicators
Hematuria (any)
SGOT 200, SGPT > 100
Hyperamylasemia

Intraperitoneal Hemorrhage
* FAST
o standard part of the initial evaluation of bluntly injured abdomens in adults
o rapid assessment of the peritoneal cavity and can detect free fluid

Intraperitoneal Hemorrhage
o Pediatrics role of FAST is still up for debate
+ Detailed information regarding the grade of organ injury is not provided by the FAST
+ operator-dependent and lacks specificity
+ FAST examination produces a significant number of false-negative results

Intraperitoneal Hemorrhage
Diagnostic Peritoneal Lavage
Trauma:Initial Stabilization Circulation
Trauma:Initial Stabilization Frequent Reassessment of Vital Signs
What Are Normal Pediatric Vital Signs?
Trauma:Initial Stabilization Pediatric Vital Signs
Trauma:Initial Stabilization Circulation: Vital Signs
Trauma:Initial Stabilization Circulation: Shock
Trauma:Initial Stabilization Circulation: Fluid Therapy
Trauma:Initial Stabilization Circulation: Fluid Therapy
Trauma:Initial Stabilization Circulation: Blood Replacement
Trauma:Initial Stabilization Circulation:Pediatric Considerations
Trauma:Initial Stabilization Disability
Trauma:Initial Stabilization Disability: Children's Glasgow Coma Scale
Trauma:Initial Stabilization Pediatric Trauma Score
Airway Normal Oral or nasal Intubated, tracheostomy
Trauma:Initial Stabilization Expose: Pediatric Considerations
Trauma:Initial Stabilization Cathertization
Trauma:Initial Stabilization Definitive Care
Questions ??
References
Trauma: Stabilization and Transport .ppt

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